Paychex

Paychex + QuickBooks Integration

Sync payroll, taxes, hours & benefits to QuickBooks automatically — no manual entry required

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Integration

What Gets Synced

Data Automatically Synced from Paychex to QuickBooks

Track every payroll item without lifting a finger

QBIS ensures full, bi-directional data syncing between your Paychex payroll system and QuickBooks, including:

  • Employees → Names, IDs, pay rates, departments
  • Payroll Entries → Wages, bonuses, reimbursements, taxes
  • General Ledger → Auto-mapped to correct chart of accounts
  • Time Tracking → Hours from Paychex Time synced to QuickBooks
  • Pay Schedules → Weekly, bi-weekly, or monthly sync

Integration Benefits

Powerful Payroll + Accounting Automation

QBIS gives you full control and visibility over your payroll accounting with:

  • Two-way sync for payroll journal entries
  • QuickBooks Online and Desktop support
  • GL code, job costing, and department mapping
  • Auto PTO and time tracking sync from Paychex Time
  • Detailed payroll reports inside QuickBooks
  • Full compatibility with Paychex Flex, HR, and 401(k)

Platform Compatibility

Fully Compatible with Major QuickBooks and Paychex Versions

Whether you're using QuickBooks in the cloud or on desktop — or managing payroll through any Paychex solution — QBIS adapts to your workflow.

  • QuickBooks Online (Essentials, Plus, Advanced)
  • QuickBooks Desktop (Pro, Premier, Enterprise)
  • Paychex Flex, Preview, Paychex Time
  • U.S. and Canada-based payroll environments

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FAQs

Yes, QBIS offers full integration support for both QuickBooks Online and Desktop versions.

Payroll journal entries, tax withholdings, employee pay, time tracking, and more.

QBIS maps your Paychex data into your QuickBooks chart of accounts automatically based on your GL mapping preferences.

Yes, employee hours tracked in Paychex Time can sync into QuickBooks journal entries.

No. Our integration is automated — you just approve payroll in Paychex and the data flows into QuickBooks.

Contact Information

India Address
QBIS Solution, Ahmedabad,
Gujarat India 382350
USA Address
15500 Voss Road, Suite #636 Sugar Land, TX 77498

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